Protein ZmOrphan220
ZmOrphan220 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan220
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym):
Uniprot ID: A0A1D6PDQ1

Protein ZmOrphan220

ZmOrphan220 is a protein in the Orphans family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00481
Zm00001eb211690_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d012962DAPseq no logo sequence fimo position
Zm00001d012962DAPseq no logo sequence fimo position
Zm00001d012962ChIPseq no logo sequence fimo position
Zm00001d012962PChIPseq no logo sequence fimo position

Interactions where ZmOrphan220 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan220 is the target  
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There are 166 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb211690_T001 from maize genome v5

Amino Acid Sequence
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MGNSLACFCCGGGAAGRRRHVAPAALPSDPAYDEGLGHSFCYVRPDKVLVPFSADDDDLVADAKAAAAAEEPTTFRAISG
AALSANVSTQLSTSVLLLLPDESSSAAAASSSSSGFESSESFAAVPLQPVPRFPSGPICAHGGGFLSGPIERGFLSGPLD
AALMSGPLPCAATSARMGGGAVPALRRSLSHGGRRLRNFTRALLARADKFQDSMDLGSAAAAACGAGSAGLQWAQGKAGE
DRVHIVVSEERGWVFVGIYDGFNGPDATDFLVSHLYAAVHRELRGLLWDQCEQEEQRDTDPDQPMSTTASYHQDQPANGR
RARRSRPPRGADDDQRRWKCEWERDCSSLKPPTQRPPRSSSENDHLAVLKALARALRKTEEAYLDVADKMVGEFPELALM
GSCVLAMLMKGEDMYLMNVGDSRAVLGTMDSVDLEEISGGSFDGLVGDGTPLLSALQLTSEHSTSVREEVCRIRNEHPGD
PSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSLYHHRLSTRDRFLILSSDGLYQYFTNE
EAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

MGNSLACFCCGGGAAGRRRHVAPAALPSDPAYDEGLGHSFCYVRPDKVLVPFSADDDDLVADAKAAAAAEEPTTFRAISG
AALSANVSTQLSTSVLLLLPDESSSAAAASSSSSGFESSESFAAVPLQPVPRFPSGPICAHGGGFLSGPIERGFLSGPLD
AALMSGPLPCAATSARMGGGAVPALRRSLSHGGRRLRNFTRALLARADKFQDSMDLGSAAAAACGAGSAGLQWAQGKAGE
DRVHIVVSEERGWVFVGIYDGFNGPDATDFLVSHLYAAVHRELRGLLWDQCEQEEQRDTDPDQPMSTTASYHQDQPANGR
RARRSRPPRGADDDQRRWKCEWERDCSSLKPPTQRPPRSSSENDHLAVLKALARALRKTEEAYLDVADKMVGEFPELALM
GSCVLAMLMKGEDMYLMNVGDSRAVLGTMDSVDLEEISGGSFDGLVGDGTPLLSALQLTSEHSTSVREEVCRIRNEHPGD
PSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSLYHHRLSTRDRFLILSSDGLYQYFTNE
EAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

MGNSLACFCCGGGAAGRRRHVAPAALPSDPAYDEGLGHSFCYVRPDKVLVPFSADDDDLVADAKAAAAAEEPTTFRAISG
AALSANVSTQLSTSVLLLLPDESSSAAAASSSSSGFESSESFAAVPLQPVPRFPSGPICAHGGGFLSGPIERGFLSGPLD
AALMSGPLPCAATSARMGGGAVPALRRSLSHGGRRLRNFTRALLARADKFQDSMDLGSAAAAACGAGSAGLQWAQGKAGE
DRVHIVVSEERGWVFVGIYDGFNGPDATDFLVSHLYAAVHRELRGLLWDQCEQEEQRDTDPDQPMSTTASYHQDQPANGR
RARRSRPPRGADDDQRRWKCEWERDCSSLKPPTQRPPRSSSENDHLAVLKALARALRKTEEAYLDVADKMVGEFPELALM
GSCVLAMLMKGEDMYLMNVGDSRAVLGTMDSVDLEEISGGSFDGLVGDGTPLLSALQLTSEHSTSVREEVCRIRNEHPGD
PSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSLYHHRLSTRDRFLILSSDGLYQYFTNE
EAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

MGNSLACFCCGGGAAGRRRHVAPAALPSDPAYDEGLGHSFCYVRPDKVLVPFSADDDDLVADAKAAAAAEEPTTFRAISG
AALSANVSTQLSTSVLLLLPDESSSAAAASSSSSGFESSESFAAVPLQPVPRFPSGPICAHGGGFLSGPIERGFLSGPLD
AALMSGPLPCAATSARMGGGAVPALRRSLSHGGRRLRNFTRALLARADKFQDSMDLGSAAAAACGAGSAGLQWAQGKAGE
DRVHIVVSEERGWVFVGIYDGFNGPDATDFLVSHLYAAVHRELRGLLWDQCEQEEQRDTDPDQPMSTTASYHQDQPANGR
RARRSRPPRGADDDQRRWKCEWERDCSSLKPPTQRPPRSSSENDHLAVLKALARALRKTEEAYLDVADKMVGEFPELALM
GSCVLAMLMKGEDMYLMNVGDSRAVLGTMDSVDLEEISGGSFDGLVGDGTPLLSALQLTSEHSTSVREEVCRIRNEHPGD
PSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSLYHHRLSTRDRFLILSSDGLYQYFTNE
EAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

MGNSLACFCCGGGAAGRRRHVAPAALPSDPAYDEGLGHSFCYVRPDKVLVPFSADDDDLVADAKAAAAAEEPTTFRAISG
AALSANVSTQLSTSVLLLLPDESSSAAAASSSSSGFESSESFAAVPLQPVPRFPSGPICAHGGGFLSGPIERGFLSGPLD
AALMSGPLPCAATSARMGGGAVPALRRSLSHGGRRLRNFTRALLARADKFQDSMDLGSAAAAACGAGSAGLQWAQGKAGE
DRVHIVVSEERGWVFVGIYDGFNGPDATDFLVSHLYAAVHRELRGLLWDQCEQEEQRDTDPDQPMSTTASYHQDQPANGR
RARRSRPPRGADDDQRRWKCEWERDCSSLKPPTQRPPRSSSENDHLAVLKALARALRKTEEAYLDVADKMVGEFPELALM
GSCVLAMLMKGEDMYLMNVGDSRAVLGTMDSVDLEEISGGSFDGLVGDGTPLLSALQLTSEHSTSVREEVCRIRNEHPGD
PSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSLYHHRLSTRDRFLILSSDGLYQYFTNE
EAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

MGNSLACFCCGGGAAGRRRHVAPAALPSDPAYDEGLGHSFCYVRPDKVLVPFSADDDDLVADAKAAAAAEEPTTFRAISG
AALSANVSTQLSTSVLLLLPDESSSAAAASSSSSGFESSESFAAVPLQPVPRFPSGPICAHGGGFLSGPIERGFLSGPLD
AALMSGPLPCAATSARMGGGAVPALRRSLSHGGRRLRNFTRALLARADKFQDSMDLGSAAAAACGAGSAGLQWAQGKAGE
DRVHIVVSEERGWVFVGIYDGFNGPDATDFLVSHLYAAVHRELRGLLWDQCEQEEQRDTDPDQPMSTTASYHQDQPANGR
RARRSRPPRGADDDQRRWKCEWERDCSSLKPPTQRPPRSSSENDHLAVLKALARALRKTEEAYLDVADKMVGEFPELALM
GSCVLAMLMKGEDMYLMNVGDSRAVLGTMDSVDLEEISGGSFDGLVGDGTPLLSALQLTSEHSTSVREEVCRIRNEHPGD
PSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSLYHHRLSTRDRFLILSSDGLYQYFTNE
EAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

MGNSLACFCCGGGAAGRRRHVAPAALPSDPAYDEGLGHSFCYVRPDKVLVPFSADDDDLVADAKAAAAAEEPTTFRAISG
AALSANVSTQLSTSVLLLLPDESSSAAAASSSSSGFESSESFAAVPLQPVPRFPSGPICAHGGGFLSGPIERGFLSGPLD
AALMSGPLPCAATSARMGGGAVPALRRSLSHGGRRLRNFTRALLARADKFQDSMDLGSAAAAACGAGSAGLQWAQGKAGE
DRVHIVVSEERGWVFVGIYDGFNGPDATDFLVSHLYAAVHRELRGLLWDQCEQEEQRDTDPDQPMSTTASYHQDQPANGR
RARRSRPPRGADDDQRRWKCEWERDCSSLKPPTQRPPRSSSENDHLAVLKALARALRKTEEAYLDVADKMVGEFPELALM
GSCVLAMLMKGEDMYLMNVGDSRAVLGTMDSVDLEEISGGSFDGLVGDGTPLLSALQLTSEHSTSVREEVCRIRNEHPGD
PSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSLYHHRLSTRDRFLILSSDGLYQYFTNE
EAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
PF00481
PF00481
Hover here to show all domains

Nucleotide Sequence
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CTCCTCGCCCCCTTTCCCGTCTCCT...

GRMZM2G144109_T01 from maize genome v3


Related TFome: pUT6605

Amino Acid Sequence
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MGNSLACFCCGGGAAGRRRHVAPAALPSDPAYDEGLGHSFCYVRPDKVLVPFSADDDDLVADAKAAAAAEEPTTFRAISG
AALSANVSTQLSTSVLLLLPDESSSAAAASSSSSGFESSESFAAVPLQPVPRFPSGPICAHGGGFLSGPIERGFLSGPLD
AALMSGPLPCAATSARMGGGAVPALRRSLSHGGRRLRNFTRALLARADKFQDSMDLGSAAAAACGAGSAGLQWAQGKAGE
DRVHIVVSEERGWVFVGIYDGFNGPDATDFLVSHLYAAVHRELRGLLWDQCEQEEQRDTDPDQPMSTTASYHQDQPANGR
RARRSRPPRGADDDQRRWKCEWERDCSSLKPPTQRPPRSSSENDHLAVLKALARALRKTEEAYLDVADKMVGEFPELALM
GSCVLAMLMKGEDMYLMNVGDSRAVLGTMDSVDLEEISGGSFDGLVGDGTPLLSALQLTSEHSTSVREEVCRIRNEHPGD
PSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSLYHHRLSTRDRFLILSSDGLYQYFTNE
EAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

Nucleotide Sequence
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CTCCTCGCCCCCTTTCCCGTCTCCT...

GRMZM2G144109_T02 from maize genome v3

Amino Acid Sequence
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MISQFLISYVALLQEVCRIRNEHPGDPSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSL
YHHRLSTRDRFLILSSDGLYQYFTNEEAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHD
DVSVIVISLEGRIWRSCV

Nucleotide Sequence
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CTCCTCGCCCCCTTTCCCGTCTCCT...

Zm00001d012962_T001 from maize genome v4

Amino Acid Sequence
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MGNSLACFCCGGGAAGRRRHVAPAALPSDPAYDEGLGHSFCYVRPDKVLVPFSADDDDLVADAKAAAAAEEPTTFRAISG
AALSANVSTQLSTSVLLLLPDESSSAAAASSSSSGFESSESFAAVPLQPVPRFPSGPICAHGGGFLSGPIERGFLSGPLD
AALMSGPLPCAATSARMGGGAVPALRRSLSHGGRRLRNFTRALLARADKFQDSMDLGSAAAAACGAGSAGLQWAQGKAGE
DRVHIVVSEERGWVFVGIYDGFNGPDATDFLVSHLYAAVHRELRGLLWDQCEQEEQRDTDPDQPMSTTASYHQDQPANGR
RARRSRPPRGADDDQRRWKCEWERDCSSLKPPTQRPPRSSSENDHLAVLKALARALRKTEEAYLDVADKMVGEFPELALM
GSCVLAMLMKGEDMYLMNVGDSRAVLGTMDSVDLEEISGGSFDGLVGDGTPLLSALQLTSEHSTSVREEVCRIRNEHPGD
PSAISKDRVKGSLKVTRAFGAGFLKQPKWNDALLEVFRIDYVGSSPYITCNPSLYHHRLSTRDRFLILSSDGLYQYFTNE
EAVAQVEMFIATTPEGDPAQHLVEEVLFRAANKAGMDFHELIEIPHGDRRRYHDDVSVIVISLEGRIWRSCV

Nucleotide Sequence
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CTCCTCGCCCCCTTTCCCGTCTCCT...


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